PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG039950.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 178aa    MW: 18849.7 Da    PI: 4.6514
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG039950.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3871.6e-2797178178
                       EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT- CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegD 78 
                       f+kv tpsdv+k++rlv+pk++ae++    +  +e++  l +ed+ g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD
  TRIDC6AG039950.3  97 FDKVVTPSDVGKLNRLVIPKQYAEKYfpldSAANEKGLLLNFEDSAGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGD 178
                       89***************************955556888*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MEFTATSSRF SKGEEEVEEE QEEASMPREI PFMTAAAATS AAAPSASASA STPASAAVSA  60
SPAGSSPPFR SGDDAGASGS GGGGGGVAEA VEKEHMFDKV VTPSDVGKLN RLVIPKQYAE  120
KYFPLDSAAN EKGLLLNFED SAGKPWRFRY SYWNSSQSYV MTKGWSRFVK EKRLDAGD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46870.14e-52B3 family protein