PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG040550.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 84aa    MW: 10010.7 Da    PI: 10.5686
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG040550.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.27.9e-101644129
                      CHHHHHHHHHHHHHHHHHHHHHHHCTSCC CS
               HLH  1 rrrahnerErrRRdriNsafeeLrellPk 29
                      +r++h ++Er+RR+++N+ +  Lr+l+P 
  TRIDC6AG040550.4 16 QRMTHIAVERNRRRQMNEYLVVLRSLMPV 44
                      79**************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 84 aa     Download sequence    
RRRARSCKSR EETECQRMTH IAVERNRRRQ MNEYLVVLRS LMPVSYVQRV RLPLPLPLPF  60
LFCIRVLLLV NEEERDAAAT WEGG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11728RMTHIAVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24140.13e-20bHLH family protein