PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG040920.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

G2-like

Protein Properties

Length: 249aa MW: 26852.5 Da PI: 10.3763

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG040920.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.8	2.1e-32	171	224	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+ TRIDC6AG040920.3 171 PRMRWTTSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 224 9****************************************************7 PP
2	Myb_DNA-binding	49.8	8e-16	172	223	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWTt ++ ++v+av++lGg+ t+k++ + m k +tl ++ks++q+y+ TRIDC6AG040920.3 172 RMRWTTSLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 223 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 249 aa Download sequence
MELFPSHPDL QLQLQINPPP ATKPMDLGFW KRALDTTAAA AATSASAAAT FTPPSIARTY 60 PSAPAAAGGG FHAAHYGAAD GHLGGLQFLQ HTQPILHEVQ DLAAMKPIRG IPVYNTSQSL 120 PFLQSQLHHH NHHHQHCYDA IGGAAGGPRS PGKVGALRLA APPAKRNSRA PRMRWTTSLH 180 ARFVHAVELL GGHERATPKS VLELMDVKDL TLAHVKSHLQ MYRTIKTTDH KPAAASSYGM 240 TSKDNHRHP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32240.1	3e-39	G2-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG040920.3