PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG041080.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 238aa    MW: 25972.6 Da    PI: 6.1578
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG041080.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY54.52.4e-174442059
                      S-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
              WRKY 20 fprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
                      ++r+YYrC+s+ gCp++k+vers++dp++++itY++eHnh+
  TRIDC6AG041080.2  4 MSRGYYRCSSSkGCPARKQVERSRTDPNMLVITYTSEHNHP 44
                      58*******998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    
MHCMSRGYYR CSSSKGCPAR KQVERSRTDP NMLVITYTSE HNHPWPTQRN VLAGSTRSHY  60
AKNSSNTDAA SSKNSKNSSR NQHKPVVKAE SKDQSAATPA ATSTTTTATT STGNNTPPMA  120
VKEEAEMERR IGGDTTATVG YYSDHLLQQM FSQSYRPMMP EEAGGYHQQD DFFADLTELD  180
SDPVSLIFST EYMEARPGKE KAAAKDDVDS LFMMDWAPAS AAVTTSAGSA LEQGDMGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30650.16e-32WRKY family protein