PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG041830.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 282aa    MW: 30140.2 Da    PI: 9.0746
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG041830.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.72.3e-0982129455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h+ +Er RR+ri +++  L+el+P +    +k   Ka +L + ++Y++sLq
  TRIDC6AG041830.4  82 SHSLAERVRRERISERMRYLQELVPGC----DKVTGKAGMLDEIINYVQSLQ 129
                       8*************************9....555*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
GSASSGGGSA KRKPDAYVDA KDDCKRPRGK QQLCDPGEAR GAAKGRPEKP KACARKKPEP  60
AAAGQKTDYI HVRARRGQAT DSHSLAERVR RERISERMRY LQELVPGCDK VTGKAGMLDE  120
IINYVQSLQK QVEFLSMKIA ASNPVVNFNI VDDLFGGRRM NQACGPAAAL PAMTLPMHQG  180
QLDPSCLQMS SATMQQMQQP AAGFGLDMLV SSSYPAAQSA PPSAAATPVS MSASATASVD  240
SCLDVNGAAA WDIASQHLFS GFDAQFQSVQ TDRRLKNLIT EL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34530.11e-36bHLH family protein