PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG042260.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 266aa    MW: 29549.1 Da    PI: 12.6179
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG042260.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.71e-08184225955
                       HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        + RR++i +++ +L+el+P+      +K++ +++LekA  Y+k Lq
  TRIDC6AG042260.1 184 AKTRREKISERLRTLQELVPNG-----TKVDMVTMLEKAFSYVKFLQ 225
                       589*****************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
GVSAGADGDV RRRLRRRGVR IRRSWLRRPR RAARKRGHGG ALRELRLRSR RASRRRQRLR  60
AGQRELGGRG AVRALVRPRR AGPRGPGGRA GGGRLRRVDG RNGRGSARRA GVDHRVRPHH  120
GLLQPDAELR RRRAAVRAPV PQRVQDAEPR AAKKPCGASR KTSKAKPAAP TTTSPKGDPQ  180
SLAAKTRREK ISERLRTLQE LVPNGTKVDM VTMLEKAFSY VKFLQLQVKV LATDEFWPAQ  240
GGTAPEISQV KEALDAILSL QRGQLN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18793GGRAGGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66470.18e-45bHLH family protein