PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG043790.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

DBB

Protein Properties

Length: 194aa MW: 21010.6 Da PI: 4.7911

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG043790.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22.2	2.9e-07	4	35	5	36
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg 36 C+ ++e++ +++C+++ lC +C + H+ TRIDC6AG043790.2 4 LCDFCGEQRPTIYCRSDAASLCLSCDRNVHSA 35 6***************************9965 PP
2	zf-B_box	25	3.9e-08	47	78	5	36
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg 36 C+++ ++++ C + ++ lC++C ++H TRIDC6AG043790.2 47 LCDRCASQPAAVRCLEENTSLCQNCDWSGHAA 78 7*****************************55 PP

Sequence ? help Back to Top
Protein Sequence Length: 194 aa Download sequence
MGALCDFCGE QRPTIYCRSD AASLCLSCDR NVHSANTLSQ RHMRTLLCDR CASQPAAVRC 60 LEENTSLCQN CDWSGHAATS MAAGHLRQTI NCYSGCPSSE VLARIWSFDF DAPSAAAEPN 120 CEEGISMMSI NDSGVSNHCG VQQDCSLLDI ANSSLMSDPP TSEKLKSEDE MNLQPLPTHQ 180 PAQSVSMAPK RYPV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G48250.1	1e-60	CO-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG043790.2