PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG043900.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NF-YB

Protein Properties

Length: 247aa MW: 26394.4 Da PI: 6.7992

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG043900.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	170.7	1.7e-53	30	126	1	97
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrel 93 vreqdr++Pianv+rim++vlP++akis+daket+qecvse+isf+t+ea+++cqre+rkti+++d+lwa++ lGf+dyvepl++yl+++re+ TRIDC6AG043900.1 30 VREQDRLMPIANVIRIMRRVLPSHAKISDDAKETIQECVSEYISFITGEANERCQREQRKTITAEDVLWAMSRLGFDDYVEPLSIYLHRFREF 122 69******************************************************************************************* PP NF-YB 94 egek 97 ege TRIDC6AG043900.1 123 EGEA 126 *985 PP

Sequence ? help Back to Top
Protein Sequence Length: 247 aa Download sequence
KMDMGFPGAA NGAAAAAAGN GGGGGQAPAV REQDRLMPIA NVIRIMRRVL PSHAKISDDA 60 KETIQECVSE YISFITGEAN ERCQREQRKT ITAEDVLWAM SRLGFDDYVE PLSIYLHRFR 120 EFEGEARGAG AGHHHHGMPP MMLKPRGAPG PMVPHGDMQM HAAGMYGGGA MPPHPHHPFH 180 MPPHHGQYPQ YEMYGGEHGM AAYYGGPYAP GNGGNNGDGS GSSGNGHGGE STPPGGNFEH 240 HQTFGYK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G47670.2	1e-55	NF-YB family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG043900.1