PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG044570.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MIKC_MADS
Protein Properties Length: 237aa    MW: 26717.2 Da    PI: 9.2315
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG044570.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF89.81.4e-281059251
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      ri+n++nrqvtfskRr g+lKKA+ELS+LCdaev +++fsstg+l+e+ss
  TRIDC6AG044570.4 10 RIDNSTNRQVTFSKRRGGLLKKAKELSILCDAEVGLVVFSSTGRLHEFSS 59
                      8***********************************************96 PP
2K-box73.27.7e-2578169898
             K-box   8 s.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                         +++++ + +q+e+a L+++++ Lq+++++l+Ge+L+sL +++Lq Le++Le sl++i+++K++ll+++ieel +k   +++en++L ++l
  TRIDC6AG044570.4  78 GvNATSEIKLWQREAASLRQQLHDLQESHKQLMGEELSSLGVRDLQGLENRLEMSLRSIKTRKDNLLRSEIEELHRKGSLIHQENTELCRRL 169
                       247888999******************************************************************************98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MGRGKIVIRR IDNSTNRQVT FSKRRGGLLK KAKELSILCD AEVGLVVFSS TGRLHEFSST  60
NMKAVIDRYT KAKEEQAGVN ATSEIKLWQR EAASLRQQLH DLQESHKQLM GEELSSLGVR  120
DLQGLENRLE MSLRSIKTRK DNLLRSEIEE LHRKGSLIHQ ENTELCRRLN IMSQQKMELS  180
RKLQSCESGG ATDANKSSST PYSFRIVQDA NIPANLELSQ AQQNEQEHSE TDAPALG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57230.12e-87MIKC_MADS family protein