PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG045570.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 325aa    MW: 34956 Da    PI: 7.2115
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG045570.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.83.7e-20171220255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                        y+GVr+++ +g+WvAeIr p++   r+r +lg+f+tae+Aa a+++a+ +l+g
  TRIDC6AG045570.2 171 LYRGVRQRH-WGKWVAEIRLPKN---RTRLWLGTFDTAEDAALAYDKAAFRLRG 220
                       59******9.**********965...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    
AIDMYKYNTS THQIGSAASA SDQELMKALE PFITIASSSS SHYPYHYYSS PSMTQDSYMA  60
TPSSSSYASS FAASPLPTTA PASPSFSQLP PLYSSQYAVN GSMGLAQLGP AQIQQIQAQF  120
FVQQQQQQQR GLAGGSFLGP RALPMKQSGS PPRASAAALA LAGVAPAQSK LYRGVRQRHW  180
GKWVAEIRLP KNRTRLWLGT FDTAEDAALA YDKAAFRLRG DLARLNFPSL RRGGAHLAGP  240
LHASVDAKLT AICESLAAPS SKNSEPESPK CSASTEGEDS ASAGSTPPVP EMEKLDFTEA  300
PWDESETFHL RKYPSVEIDW DSILS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78080.16e-50ERF family protein