PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG046110.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TCP

Protein Properties

Length: 406aa MW: 41018.2 Da PI: 9.4146

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG046110.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	133.9	1.4e-41	62	238	2	137
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg..... 88 +k+++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pa++++tgt++++a+++ + s +ss+s+ s++ TRIDC6AG046110.3 62 VPKRTSTKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKTDGETIEWLLQQAEPAVIAATGTGTIPANFTsLNISLRSSGSSLSIPahlrg 154 689****************************************************************999989999999998888899999 PP TCP 89 ..............................kaaksaa.kskksqksaasalnlakesrakarar....are.rtrekmriknkln 137 + ++s++ + + +s + l+++ + +a a a +r+ r++++m+++++++ TRIDC6AG046110.3 155 alpspgvrfgsradawdrvvglgyppegpaS-SSSTPsPLLLNFHSGSVGLDVQPSPSAAAAAAaadlSRKrRWEQEMQQQQQQQ 238 99999*********************963.44444477788888887788888655444444355666657777777766654 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
LTMDIAGDAG GGRRPNFPLQ LLEKKEEQPC SSSAAGGTSG GGGNGAAAGG AAGGEMQVRK 60 AVPKRTSTKD RHTKVEGRGR RIRMPALCAA RVFQLTRELG HKTDGETIEW LLQQAEPAVI 120 AATGTGTIPA NFTSLNISLR SSGSSLSIPA HLRGALPSPG VRFGSRADAW DRVVGLGYPP 180 EGPASSSSTP SPLLLNFHSG SVGLDVQPSP SAAAAAAAAD LSRKRRWEQE MQQQQQQQHH 240 QQQQQQQYQQ QMAGYTQSQM PGTVWMVPSN YSQGSGAPSG GGNGGGGGGS GESIWTFPQV 300 GSAGAAAAVY RGSVPSGLHF MNFPTPMALL PGQQLGLGPV GGSGGGAGGT EGQMGILAAL 360 NAYRTQAAEA AAGQGGGGGG GSSSQQQHGG GGGGGERHES MSTSES

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

LTMDIAGDAG GGRRPNFPLQ LLEKKEEQPC SSSAAGGTSG GGGNGAAAGG AAGGEMQVRK  60
AVPKRTSTKD RHTKVEGRGR RIRMPALCAA RVFQLTRELG HKTDGETIEW LLQQAEPAVI  120
AATGTGTIPA NFTSLNISLR SSGSSLSIPA HLRGALPSPG VRFGSRADAW DRVVGLGYPP  180
EGPASSSSTP SPLLLNFHSG SVGLDVQPSP SAAAAAAAAD LSRKRRWEQE MQQQQQQQHH  240
QQQQQQQYQQ QMAGYTQSQM PGTVWMVPSN YSQGSGAPSG GGNGGGGGGS GESIWTFPQV  300
GSAGAAAAVY RGSVPSGLHF MNFPTPMALL PGQQLGLGPV GGSGGGAGGT EGQMGILAAL  360
NAYRTQAAEA AAGQGGGGGG GSSSQQQHGG GGGGGERHES MSTSES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69690.1	1e-45	TCP family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG046110.3