PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG047960.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 327aa MW: 36185.7 Da PI: 5.6171

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG047960.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59	1.1e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l d+++++G g+W++ ++ g++R++k+c++rw +yl TRIDC6AG047960.3 14 KGPWTAEEDQKLTDYIEKHGHGSWRALPKLAGLNRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	58.5	1.5e-18	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++ +++++ lG++ W++Ia++++ gRt++++k++w+++l TRIDC6AG047960.3 67 RGKFTPEEEQTILQLHSVLGNK-WSAIAKHLP-GRTDNEIKNFWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MGRSPCCDEN GLKKGPWTAE EDQKLTDYIE KHGHGSWRAL PKLAGLNRCG KSCRLRWTNY 60 LRPDIKRGKF TPEEEQTILQ LHSVLGNKWS AIAKHLPGRT DNEIKNFWNT HLKKKLIQMG 120 FDPMTHRPRT DFFAALPQLI ALANLRQLVE QRPWDDQSAS QLQADAVQAA KLEYLQCLLQ 180 SAAAIATSPS SSSINTIPTD LEQIGLLSPS RMSSLSSLSS PRIMEGVNGH DLVTGQVPGI 240 QIPSSSFFEH EQAIINCTNQ NSDYSANSGE GEKLLLLSED SLPPLADFPT SNFGDACSTS 300 SCEAVGNSTQ LPIWSDSFYD EFMSEFA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34670.1	1e-103	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG047960.3