PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG047960.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 244aa    MW: 26600.6 Da    PI: 4.255
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG047960.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.11.2e-091252348
                      -HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding 23 tWktIartmgkgRtlkqcksrwqkyl 48
                      +W++Ia++++ gRt++++k++w+++l
  TRIDC6AG047960.6  1 RWSAIAKHLP-GRTDNEIKNFWNTHL 25
                      4*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
RWSAIAKHLP GRTDNEIKNF WNTHLKKKLI QMGFDPMTHR PRTDFFAALP QLIALANLRQ  60
LVEQRPWDDQ SASQLQADAV QAAKLEYLQC LLQSAAAIAT SPSSSSINTI PTDLQQIGLL  120
SPSQMSSLSS LSSPRILEGI NGQDLVTGQV SDIQIPSSSF FEHEQPIING TNQNSDYSAN  180
SGEGENGTQK PLLLSEDSLP PLADFPISNL GDACSTSSCD AEGNGTQLPI WSDSFYDEFM  240
SEFA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34670.12e-36MYB family protein