PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG048010.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 188aa    MW: 19730 Da    PI: 8.231
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG048010.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.43.6e-18108159156
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkklege 56 
                       s++ GVr+++ +g+W+AeIrdp     +   r +lg+f+ta +Aa+a++ a+++++g+
  TRIDC6AG048010.1 108 SKFGGVRQRS-WGKWAAEIRDP-----HraVRQWLGTFDTAVDAARAYDLAALEFRGH 159
                       7999***999.**********7.....338**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MAPRLERGGR GFQLPNSELE DSLFLRALIS VVNGDAVVPT LHLEPSSTPH FAAAVPACAS  60
CGVDGCIGCM FVAAAATADS SSGGEECSAA SFVKDGGVGK ITRRRSRSKF GGVRQRSWGK  120
WAAEIRDPHR AVRQWLGTFD TAVDAARAYD LAALEFRGHR ARLNFPDAAA SSSSAASVSD  180
SSWTAAQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33710.13e-20ERF family protein