PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG049470.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 168aa    MW: 19499.7 Da    PI: 6.5139
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG049470.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.27.7e-085597145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                      r +W++ + +l++++ +q+G++ ++ I + ++  +++ q++ ++ 
  TRIDC6AG049470.5 55 RAKWSKSDTDLFYQGLQQFGSN-FAMIQQLFP-DKSRDQVRQKFK 97
                      569*****************99.*********.*********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MSCSLLISFH ISSQFGGTDT FDPFGENYDN DRIENHVLEN ATKLNYYSYM NKQTRAKWSK  60
SDTDLFYQGL QQFGSNFAMI QQLFPDKSRD QVRQKFKTEE KKHPMQVHDA ILHRSRDTLY  120
LKQVIKQLNI EDLQRGMNSA QKQEVGSIEG DTGNEVSFFL SETNTHSV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39160.14e-32MYB_related family protein