PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG049480.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 230aa    MW: 24247.7 Da    PI: 4.4845
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG049480.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.5e-183180255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      +ykGVr ++ +g+Wv+eIr p   ++++r++lg++ tae Aa+a++aa ++l+g
  TRIDC6AG049480.1 31 QYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALLCLRG 80
                      69****998.**********9...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
QQVALGGDGG NAAAARQGGG GGGRQQQQQQ QYKGVRMRSW GSWVSEIRAP NQKTRIWLGS  60
YSTAEAAARA YDAALLCLRG SAADLNFPVH LPFHVPAAAM SPKSIQRVAA AAAATAGSPL  120
QPPHTMASSA SWPGAAPPCG YGDNAPSFGS PEDQSARHSN ADDDETMAHG DDGVDYDALA  180
DIDAFFQSPK CMDYATMMDP CSTFFAPAPM APVEWEEEGE ISLWSFSSYN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.15e-27ERF family protein