PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG049480.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 229aa    MW: 24119.5 Da    PI: 4.4845
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG049480.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.5e-183079255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      +ykGVr ++ +g+Wv+eIr p   ++++r++lg++ tae Aa+a++aa ++l+g
  TRIDC6AG049480.2 30 QYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALLCLRG 79
                      69****998.**********9...336*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
QVALGGDGGN AAAARQGGGG GGRQQQQQQQ YKGVRMRSWG SWVSEIRAPN QKTRIWLGSY  60
STAEAAARAY DAALLCLRGS AADLNFPVHL PFHVPAAAMS PKSIQRVAAA AAATAGSPLQ  120
PPHTMASSAS WPGAAPPCGY GDNAPSFGSP EDQSARHSNA DDDETMAHGD DGVDYDALAD  180
IDAFFQSPKC MDYATMMDPC STFFAPAPMA PVEWEEEGEI SLWSFSSYN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.15e-27ERF family protein