PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG050080.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YA
Protein Properties Length: 203aa    MW: 22619.5 Da    PI: 10.8576
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG050080.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA105.45e-3347103158
         CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                       dep++VN+KQy++Il+RRq Rakle+++kl +k+rkpylheSRh hA++R+RgsgGrF
  TRIDC6AG050080.2  47 DEPIFVNPKQYNGILRRRQLRAKLEAQNKL-TKNRKPYLHESRHLHAMKRARGSGGRF 103
                       79****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MRHSYVHFQF FMDMTDQLYM EQFQPLMAGG GASATARVPL PVELAADEPI FVNPKQYNGI  60
LRRRQLRAKL EAQNKLTKNR KPYLHESRHL HAMKRARGSG GRFLNSKQLK QQQQSGSACT  120
KAIADGANSL GSTHLRLGSG PAGDRTNSVS KAMSSQENSK RVAAPAPAFT MIQAARKDDD  180
FFHHHAHHLS FSGHFGQSSD RYT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54160.13e-34NF-YA family protein