PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG050100.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 351aa MW: 37091.4 Da PI: 6.5095

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG050100.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38.9	1.6e-12	122	173	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h +Er+RR+++N+ + Lr+l+P + + + + a+i A++Y+k+L+ TRIDC6AG050100.1 122 QRMTHITVERNRRKQMNEYLGVLRSLMPAS---YVHRGDQASIIGGAINYVKELE 173 79**************************...9****************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MALEAVVFSK GFFGRCAMAA EGVGGGGGVW GGNEHGHGGG VELDGSNAHC GAAVASASVM 60 IPSAEVPEGS SSLLALPPPG HGGDRGDADD GAVGAASASG AAGRRKRRRA RSVKNIEEAE 120 SQRMTHITVE RNRRKQMNEY LGVLRSLMPA SYVHRGDQAS IIGGAINYVK ELEQLVQSLE 180 AHRHARLRDD CPVSGDVDSA AAVPFVDFFT FPQYTMSVRH APATPAADAS ADGSGGNADN 240 DGTSGSKQSA VADIEVTIVE SHASLKVLSR RRPRQLLRIV AGLQGHRLAV LHLNATSAGH 300 MALYCLSLKV EDDCRLSSVD DIAAAVHRIV ETIEREEEEE ERRRQQQQSC T

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MALEAVVFSK GFFGRCAMAA EGVGGGGGVW GGNEHGHGGG VELDGSNAHC GAAVASASVM  60
IPSAEVPEGS SSLLALPPPG HGGDRGDADD GAVGAASASG AAGRRKRRRA RSVKNIEEAE  120
SQRMTHITVE RNRRKQMNEY LGVLRSLMPA SYVHRGDQAS IIGGAINYVK ELEQLVQSLE  180
AHRHARLRDD CPVSGDVDSA AAVPFVDFFT FPQYTMSVRH APATPAADAS ADGSGGNADN  240
DGTSGSKQSA VADIEVTIVE SHASLKVLSR RRPRQLLRIV AGLQGHRLAV LHLNATSAGH  300
MALYCLSLKV EDDCRLSSVD DIAAAVHRIV ETIEREEEEE ERRRQQQQSC T

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	105	109	RKRRR
2	123	134	RMTHITVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22490.1	7e-65	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG050100.1