PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG050100.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 298aa MW: 31105.7 Da PI: 7.4491

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG050100.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.2	1.2e-12	102	153	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h +Er+RR+++N+ + Lr+l+P + + + + a+i A++Y+k+L+ TRIDC6AG050100.3 102 QRMTHITVERNRRKQMNEYLGVLRSLMPAS---YVHRGDQASIIGGAINYVKELE 153 79**************************...9****************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
EGVGGGGGVW GGNEHGHGGG VELDGSNAHC GAAVASASVM IPSAEVPEGS SSLLALPPPG 60 HGGDRGDADD GAVGAASASG AAGRRKRRRA RSVKNIEEAE SQRMTHITVE RNRRKQMNEY 120 LGVLRSLMPA SYVHRGDQAS IIGGAINYVK ELEQLVQSLE AHRHARLRDD CPVSGDVDSA 180 AAVPFVDFFT FPQYTMSVRH APATPAADAS ADGSGGNADN DGTSGSKQSA VADIEVTIVE 240 SHASLKVLSR RRPRQLLRIV AGLQGHRLAV LHLNATSAGH MALYCLSLKR KDEAALLF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	85	89	RKRRR
2	103	114	RMTHITVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22490.1	3e-57	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG050100.3