PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG050700.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 181aa    MW: 19402.1 Da    PI: 7.2711
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG050700.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF63.13e-202269249
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                      rie++  rqv fskRr+g++KK +EL vLC+aeva ++fs+ gk + +
  TRIDC6AG050700.1 22 RIESEEARQVCFSKRRAGLFKKVSELAVLCGAEVAAVVFSPAGKAFSF 69
                      8******************************************97766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
GSMSMAPKRK LSMGRQKIEI RRIESEEARQ VCFSKRRAGL FKKVSELAVL CGAEVAAVVF  60
SPAGKAFSFG HPSVEAILDR FIPSAAAQVG AAAGLGAAGD RNLAELNRQY GQLREQLEAE  120
KARKDRAEEA MAEERAKGSP AAAWLDADLR DLGEEELMAF AAALADVQTA VSARANQVLQ  180
E
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.15e-26M-type_MADS family protein