PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG050990.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 169aa    MW: 18290.5 Da    PI: 11.4706
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG050990.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.33.4e-172372255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      +ykGVr++k +g+Wv+eIr p++   r r++lg+++ +e+Aa+a +aa  +l+g
  TRIDC6AG050990.1 23 KYKGVRRRK-WGKWVSEIRLPNS---RERIWLGSYDAPEKAARAFDAAFVCLRG 72
                      8*****998.**********933...5*********************999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
GMSTLSPVSG AASPEAEGGG GRKYKGVRRR KWGKWVSEIR LPNSRERIWL GSYDAPEKAA  60
RAFDAAFVCL RGPGAAGADL NFPDSPPPPC RHSVDPQEVQ AAALSHANRA AVSVREAAAA  120
LMEDDCSRAP AALSTEQWPV TWRPRRTAAW TGARSWRTSR RSSRRRPAG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12531KGVRRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G21960.12e-22ERF family protein