PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG052040.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 161aa    MW: 17702.4 Da    PI: 9.152
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG052040.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.85.2e-08122158236
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS- CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmg..kgRt 36 
                       ++WT++Ed  l  +v++ G g+W  I r+ +   +Rt
  TRIDC6AG052040.3 122 KAWTKDEDAELRAGVHKCGEGNWLDILRKYNfdSTRT 158
                       68**************************999777776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
RTSRTAAPSR WGDESDLECE IEPSPKPSNE AAAEASRFAK ILMYGPSREQ GSSHRANSDV  60
PLLNTPNEKI PRVSSDKQLA QSHRLTNGTG PVSNSKQAPH TGLSPDSFDG NGPHNKKTKK  120
TKAWTKDEDA ELRAGVHKCG EGNWLDILRK YNFDSTRTYG Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09710.21e-09MYB_related family protein