PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG053700.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 191aa    MW: 19433.7 Da    PI: 5.2459
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG053700.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.16.4e-0813501355
                      HHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH 13 RdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                      R+ri +++  L+el+P+a      K +Ka++L + ++Y+k Lq
  TRIDC6AG053700.3 13 RERIAERMKALQELVPNA-----NKTDKASMLDEIIDYVKFLQ 50
                      89***************8.....6******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
GRPPTPTASP SVRERIAERM KALQELVPNA NKTDKASMLD EIIDYVKFLQ LQVKVLSMSR  60
LGGAAAVGPL VAGLSSESSG NGNGTSSSGD GNGDDDNGGS TLRATEQQVA RLMEEDMGTA  120
MQYLQGKGLC LMPISLASVI SSATSSSLRS ATRPAGNAGG PLHEGGSPAS PRLVNSMGTD  180
GSRTIGDGSG Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24260.16e-41bHLH family protein