PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG053770.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARR-B
Protein Properties Length: 618aa    MW: 66252.1 Da    PI: 6.2401
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG053770.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like871.8e-27154207155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       +pr++W+ eLH++Fv a+++L G++kA+Pk+ilelm+v+ Lt+e+v+SHLQkYRl
  TRIDC6AG053770.2 154 RPRVVWSVELHRKFVAALNHL-GIDKAVPKRILELMNVEKLTRENVASHLQKYRL 207
                       59*******************.********************************8 PP
2Myb_DNA-binding33.59.9e-11156206148
                       TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                       r  W+ e++ ++v a + lG +   +k+I + m+ +++t++++ s++qky+
  TRIDC6AG053770.2 156 RVVWSVELHRKFVAALNHLGIDkaVPKRILELMNvEKLTRENVASHLQKYR 206
                       678********************************99*************7 PP
3Response_reg49.91.7e-1767343109
                       H..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HHHHHH CS
      Response_reg  43 d..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpeelvk 109
                       +  +Dl++ D+ mp+mdG++ll+     e++lp+i+++ +ge +++ + +  Ga d+l Kp+ +eel++
  TRIDC6AG053770.2   6 RdmFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSVNGETKTVMKGITHGACDYLLKPVRIEELRN 73 
                       3469******************87754.558************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 618 aa     Download sequence    
MLRENRDMFD LVISDVHMPD MDGFKLLELV GLEMDLPVIM LSVNGETKTV MKGITHGACD  60
YLLKPVRIEE LRNIWQHVVR RKFSTRDSVN LDTYEECNKP PSADSDYVFG QVTCGSPDQS  120
GRPSKKRKEY HSEEEDEDED SSGQDNDDPS APKRPRVVWS VELHRKFVAA LNHLGIDKAV  180
PKRILELMNV EKLTRENVAS HLQKYRLYLR RLSAVASQQA GIVAALGGRD PFLRMDAFEG  240
LQGYQAFTSP AALSTFSAHG LLNSPRNNQT AVVIQGVATS RSIPTGSSSC TTNPLIGDAA  300
KYHLSLPGNQ HGNLGQGLAT SLGQAQLQQK WMNEGSGDLS TILSGNSRAN GMPRMLPSVT  360
SSPLLPPDLV ECTQAKVAIQ PSVRAPSASV ELLEGAIGAS SGPLESRVSQ QSALPSSGFS  420
ANMLPVHGSF SNNGASFSSN GATRLGDAFS ASFRPTNDLT VARGTKVGAG SFGGTIHLSP  480
DTEQKYVSFG SSDSLLDPKL VWSSSQLPSN IGAHYHSMSQ RSNNCSIDSS HGGRMFGQTS  540
ASASTAAPQT KFDILFSGDT SMARNASESG AQRLQSELSS STCSFDGLLN SMIKVEKDDA  600
AFGGDDLGCD FYSLGACI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.19e-81ARR-B family protein