PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG055790.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 244aa    MW: 27175 Da    PI: 8.2473
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG055790.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.21.6e-14142955
                      HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                      E+rRR +iN+++  L++l+P++      K +Ka++L  A+eY+k+Lq
  TRIDC6AG055790.2  1 EKRRRCKINEKMKALQSLVPNS-----SKTDKASMLDDAIEYLKHLQ 42
                      9********************8.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 244 aa     Download sequence    
EKRRRCKINE KMKALQSLVP NSSKTDKASM LDDAIEYLKH LQLQVQQMLS MRNGMYRPSV  60
NLPGAAGHLP TSQMCAALNQ NSVDASSNPP AAMLPMNHFL GAMSGARPSF DHPNQDRPRH  120
EPLVLSSVPC TTTREPPFLL GPSQESPLRS LQLTLPAEMI FQEEAMLKHW LCSTQETASV  180
PGHEMKPVRQ ETPAARAGHF DTCSIWKNQP QDMVPNNTES ILFVPHLQRF QNSNADSGLR  240
AESK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36930.11e-24bHLH family protein