PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG055920.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 405aa    MW: 43149.5 Da    PI: 4.9716
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG055920.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA551.1e-17325358134
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                       C +C+  kTp+WR gp g+ktLCnaCG++y++ +
  TRIDC6AG055920.5 325 CMHCQIDKTPQWRAGPLGPKTLCNACGVRYKSGR 358
                       99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    
MASGRFMEEM MREHEQSLLE ATCGGLFDHI EDLLDFPKED SAEDVLLLDA PVPDSPLAAR  60
VLAGGAPPPA PASLEQQQQQ ASLMVPPPPP AGDHSAAFLG ALGDTHIGTC DELDMDMAQL  120
EWLSGLFDDT SIPHEPAFAC AAPIIRASAL SANAGVVLPD KMEDALFRSS SPTSVLEDGA  180
NNVNVNMNNN NSGGSSASST SSSASSSSES FSGSGRPWSV PLSPRPEPPV LVIPARARSK  240
RSRASAFPAA IRAAVPAPET ILVPTPMFSS TSSYSEEPEC IAESNSQPKK KKKAKRPTPP  300
VTSDAEGDAD YEEGSGLAPG EVRRCMHCQI DKTPQWRAGP LGPKTLCNAC GVRYKSGRLF  360
PEYRPAASPT FVPAIHSNSH KKVVEMRQKV EPKGDDLLQF IRRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.23e-38GATA family protein