PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG056350.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 306aa    MW: 33841.9 Da    PI: 6.9543
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG056350.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM158.72.3e-49101471128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkklel..eevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                       lppGfrF P+deelv++yL+ kv+++++    + ++ evd++ +ePw+Lp  +k +++ewyfFs rd+kyatg r+nrat+sgyWkatgkd+ 
  TRIDC6AG056350.1  10 LPPGFRFYPSDEELVCHYLHGKVANQRFAGgaAGTMVEVDLHVHEPWELPDVAKLSTNEWYFFSFRDRKYATGLRTNRATRSGYWKATGKDRV 102
                       79*************************65511346***************87788999*********************************** PP

               NAM  92 vlsk........kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       + s         + + vg++ktLvfy+grap+g+kt Wvmhe+r+
  TRIDC6AG056350.1 103 IRSPrssssrsgRAAIVGMRKTLVFYRGRAPNGSKTCWVMHEFRI 147
                       **99665555444444***************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MGLRDIEMTL PPGFRFYPSD EELVCHYLHG KVANQRFAGG AAGTMVEVDL HVHEPWELPD  60
VAKLSTNEWY FFSFRDRKYA TGLRTNRATR SGYWKATGKD RVIRSPRSSS SRSGRAAIVG  120
MRKTLVFYRG RAPNGSKTCW VMHEFRIENP HAPPKEDWVL CRVFHKKKAD TEYAMDGEQE  180
IVGGMARSAA AVSGSNYVSS SACHDPQYHH SPTAPFPSLG AGGHPYQLTS CDHHHTHGAA  240
GVSLADMDPF ADMPPLTSYD SILDFSQQLQ GGGAGLRDGA GDQCGGELMD LGLQVQEEHY  300
NYNSLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G28530.12e-71NAC family protein