PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG056720.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 224aa    MW: 24046.9 Da    PI: 8.6096
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG056720.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.92.2e-1753105155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       + ++GVr++ + grWv+e+r+p ++   +r +lg++ tae Aa+a++aa++ l+g
  TRIDC6AG056720.1  53 PVFRGVRRRGNAGRWVCEVRVPGDR--GTRLWLGTYFTAEAAARAHDAAMLMLRG 105
                       579******************9555..5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 224 aa     Download sequence    
LRCQNASCHM ASGRDAATRS ASSSSTTERG GTAWPWPPKR PAGRTKFRET RHPVFRGVRR  60
RGNAGRWVCE VRVPGDRGTR LWLGTYFTAE AAARAHDAAM LMLRGRSAAC LNFRDSAWLL  120
SVPPAFSNLS DVRRAAVQAV ADFLRRPEAT GAAAGAGQEV TSSVAVQSSA ACSVPSSETA  180
QTSGDATFEE PGALSMDMFD LDCLFGETDS DTYYYANLAQ GLLM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25480.15e-30ERF family protein