PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG057480.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 280aa    MW: 31038.3 Da    PI: 9.7345
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG057480.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP243.96.1e-142270355
               AP2  3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                      + G+r+++ r rW AeIrdp     +  r +lg+f +aeeAa+a++  +++++g
  TRIDC6AG057480.2 22 FMGIRQRS-RARWGAEIRDPI----KgVRLWLGTFNSAEEAARAYDVEARRIHG 70
                      78***999.8*********72....46************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MTTNDVDGSA QRSAKRKSKN QFMGIRQRSR ARWGAEIRDP IKGVRLWLGT FNSAEEAARA  60
YDVEARRIHG KKAKINFPEE PKLPQKSRAP PASPKVPKPS VAQEHSFIPA FNNLVNQNAF  120
VYPSAHFASK QPLVQPENVP FVPPMSTIAP VEAPVMNMYS DQGSNSFGFS KLGWKYHTKT  180
PDISSIAPIS TIAEGAEPVL VKNNTYNSLA PPIMENNVVN FEPWMRYLMD DSVDEMIDSL  240
LNFDVPRDVI SNRTFGASMP CPSVANFSVG SKPCISGQRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72360.12e-28ERF family protein