PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG057870.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 258aa    MW: 27188.1 Da    PI: 7.2225
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG057870.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.73.3e-192777155
               AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                      +++ GVr+++ +grWvAeI+d       +  r++lg+f taeeAa+a+++a+  l+g
  TRIDC6AG057870.1 27 CKFVGVRQRP-SGRWVAEIKDtT-----HkIRVWLGTFETAEEAARAYDEAACLLRG 77
                      799*******.7*********33.....35**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    
QQQQCQYEAA VGKAAAAAAK GRGSSKCKFV GVRQRPSGRW VAEIKDTTHK IRVWLGTFET  60
AEEAARAYDE AACLLRGSNT RTNFATAASA SPPPPRAPSQ QPAVTIRLAT AASNGSAGNN  120
TSSTSSTISF AMSASGAAAH HTPTPTSLSN HMTYHQWISH GSEQLHQHLE HQPWPATLSP  180
AVPTLAARRN VAECRVIADG ARPEKQDQDS ASPGAAMSGV VQQEQDDGFD IGNDPCDSLW  240
DLPPICQLSC LAGLSSCT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.16e-23ERF family protein