PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG058060.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 236aa    MW: 26323.8 Da    PI: 7.115
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG058060.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.91.1e-08141190147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 
                       r +++  E ellv+av++lG g+Wk + ++     + Rt  ++k++w ++
  TRIDC6AG058060.3 141 RRPFSVAEVELLVEAVELLGFGRWKNVKNHAFrdnEERTYVDLKDKWKNL 190
                       678999*************************99**99**********997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MDAVTSKIEG SLSVSVLLQG KIIQDDNKTL HQAGICHGAK PDSIGFTLEC EAKQDSRPSG  60
LAPEEMDSAG PSVVNPLSKI KFEQPFISCT LGDYPYEGAA QVRSEICQAI VPYGTSNPDA  120
LAIVPVVPRS RQRDFGQRRK RRPFSVAEVE LLVEAVELLG FGRWKNVKNH AFRDNEERTY  180
VDLKDKWKNL VHTASIPPQL RRGRAIPPQD LLDRVLAAQA YWTVHHAKRD EEEGRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07540.12e-37MYB_related family protein