PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG058060.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 271aa    MW: 30203.5 Da    PI: 7.5467
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG058060.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.61.4e-08176225147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 
                       r +++  E ellv+av++lG g+Wk + ++     + Rt  ++k++w ++
  TRIDC6AG058060.5 176 RRPFSVAEVELLVEAVELLGFGRWKNVKNHAFrdnEERTYVDLKDKWKNL 225
                       678999*************************99**99**********997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
VLLRAVMFII KSFNIPELSI EVPENATVGS LKRIVMDAVT SKIEGSLSVS VLLQGKIIQD  60
DNKTLHQAGI CHGAKPDSIG FTLECEAKQD SRPSGLAPEE MDSAGPSVVN PLSKIKFEQP  120
FISCTLGDYP YEGAAQVRSE ICQAIVPYGT SNPDALAIVP VVPRSRQRDF GQRRKRRPFS  180
VAEVELLVEA VELLGFGRWK NVKNHAFRDN EERTYVDLKD KWKNLVHTAS IPPQLRRGRA  240
IPPQDLLDRV LAAQAYWTVH HAKRDEEEGR D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07540.12e-51MYB_related family protein