PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG058420.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 822aa MW: 93872.3 Da PI: 6.7229

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG058420.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.5	1.2e-19	210	294	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++Yn+YA ++GF v++ +++k+ + ++ C+++ k + ++ +++r++++ ++t+C+ak+ vk+ +g+w+++ +++eHnH+l+p TRIDC6AG058420.1 210 EYYNTYALQTGFVVVRGRNYKR------QRFQLDCNRNRKVKLVEDLnLKRKRKKNVIEKTNCQAKIIVKLI-KGEWVIAAVQNEHNHPLSP 294 69*****************9......4677**9988755543799999**************.9*************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 822 aa Download sequence
RAAGSHAQQV PVAVAAPPTS SRVVAKSSNS SAKTPGSSSN KRVIYIVAGD DGSHVPILRK 60 VQVYGEEASK GYEKTPAPAC NVVKQARLDA GKQPVRRPRI QLLSHNREER SAELMDDDEE 120 AAIALSVKLE RNASYVDRSL QLVTAEEHDV MEIDDISSDD TGSQSDSDSS SGSESEKEEG 180 RFFYPAPEAL GTVKAPQVGM KFPTLEDAHE YYNTYALQTG FVVVRGRNYK RQRFQLDCNR 240 NRKVKLVEDL NLKRKRKKNV IEKTNCQAKI IVKLIKGEWV IAAVQNEHNH PLSPSRSFTR 300 FLTSQKHMSP EERSFSRVLQ QSRVPPGEIL KILRRMSGFF RELPSKEKQA LILQSAEQWR 360 KANLDVEKTL NHFEQLQLQD PCFFYTVQKD EDGTLRSIFW TDARSRMDYE IFGDFVSFNT 420 TFSTNRHNMP FVPITGMNSR GRTIVLGCAL LQDRKAETYK WMLETFLQEM GGGQIPRSVI 480 TSQDEAMAKA IAEVMPQARH RFCRWNGKAQ EKMAAFVAAR GNMKAELDIL VDSSLTETEF 540 EQGWSALIQR HDASENEYLQ LLWEMRKTWA PVYFMQDFFP FVVSARGSQG AFSLFKENVL 600 PKDKIENLIE KYEEMQDKIK KTDEEDVLEA ATEPSCFSLQ PIERHASRVY TRQIFLKVQK 660 ELLHSTAFKV QEIERGTLYR LDKAYSYENP EYDRDSFEVS IEPGLTDTYT CQCTKFARDG 720 ILCCHVFRLF TQFGIDEIPE KYIVARWTDG FREEQLERRE EGRLVVAAQR EEDAARYAAL 780 MSKAAGIGRE ICGDGAKCDE FMLELDRIRE KMATMAMAND HV

Sequence ? help Back to Top

Protein Sequence Length: 822 aa Download sequence

RAAGSHAQQV PVAVAAPPTS SRVVAKSSNS SAKTPGSSSN KRVIYIVAGD DGSHVPILRK  60
VQVYGEEASK GYEKTPAPAC NVVKQARLDA GKQPVRRPRI QLLSHNREER SAELMDDDEE  120
AAIALSVKLE RNASYVDRSL QLVTAEEHDV MEIDDISSDD TGSQSDSDSS SGSESEKEEG  180
RFFYPAPEAL GTVKAPQVGM KFPTLEDAHE YYNTYALQTG FVVVRGRNYK RQRFQLDCNR  240
NRKVKLVEDL NLKRKRKKNV IEKTNCQAKI IVKLIKGEWV IAAVQNEHNH PLSPSRSFTR  300
FLTSQKHMSP EERSFSRVLQ QSRVPPGEIL KILRRMSGFF RELPSKEKQA LILQSAEQWR  360
KANLDVEKTL NHFEQLQLQD PCFFYTVQKD EDGTLRSIFW TDARSRMDYE IFGDFVSFNT  420
TFSTNRHNMP FVPITGMNSR GRTIVLGCAL LQDRKAETYK WMLETFLQEM GGGQIPRSVI  480
TSQDEAMAKA IAEVMPQARH RFCRWNGKAQ EKMAAFVAAR GNMKAELDIL VDSSLTETEF  540
EQGWSALIQR HDASENEYLQ LLWEMRKTWA PVYFMQDFFP FVVSARGSQG AFSLFKENVL  600
PKDKIENLIE KYEEMQDKIK KTDEEDVLEA ATEPSCFSLQ PIERHASRVY TRQIFLKVQK  660
ELLHSTAFKV QEIERGTLYR LDKAYSYENP EYDRDSFEVS IEPGLTDTYT CQCTKFARDG  720
ILCCHVFRLF TQFGIDEIPE KYIVARWTDG FREEQLERRE EGRLVVAAQR EEDAARYAAL  780
MSKAAGIGRE ICGDGAKCDE FMLELDRIRE KMATMAMAND HV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	252	259	LKRKRKKN
2	254	258	RKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-76	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG058420.1