PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG058420.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 852aa MW: 96960.7 Da PI: 6.4325

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG058420.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	62.4	1.3e-19	240	324	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 ++Yn+YA ++GF v++ +++k+ + ++ C+++ k + ++ +++r++++ ++t+C+ak+ vk+ +g+w+++ +++eHnH+l+p TRIDC6AG058420.6 240 EYYNTYALQTGFVVVRGRNYKR------QRFQLDCNRNRKVKLVEDLnLKRKRKKNVIEKTNCQAKIIVKLI-KGEWVIAAVQNEHNHPLSP 324 69*****************9......4677**9988755543799999**************.9*************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 852 aa Download sequence
MEEYLAAYTA KEDPATPAQP AVQTASALPA RAAGSHAQQV PVAVAAPPTS SRVVAKSSNS 60 SAKTPGSSSN KRVIYIVAGD DGSHVPILRK VQVYGEEASK GYEKTPAPAC NVVKQARLDA 120 GKQPVRRPRI QLLSHNREER SAELMDDDEE AAIALSVKLE RNASYVDRSL QLVTAEEHDV 180 MEIDDISSDD TGSQSDSDSS SGSESEKEEG RFFYPAPEAL GTVKAPQVGM KFPTLEDAHE 240 YYNTYALQTG FVVVRGRNYK RQRFQLDCNR NRKVKLVEDL NLKRKRKKNV IEKTNCQAKI 300 IVKLIKGEWV IAAVQNEHNH PLSPSRSFTR FLTSQKHMSP EERSFSRVLQ QSRVPPGEIL 360 KILRRMSGFF RELPSKEKQA LILQSAEQWR KANLDVEKTL NHFEQLQLQD PCFFYTVQKD 420 EDGTLRSIFW TDARSRMDYE IFGDFVSFNT TFSTNRHNMP FVPITGMNSR GRTIVLGCAL 480 LQDRKAETYK WMLETFLQEM GGGQIPRSVI TSQDEAMAKA IAEVMPQARH RFCRWNGKAQ 540 EKMAAFVAAR GNMKAELDIL VDSSLTETEF EQGWSALIQR HDASENEYLQ LLWEMRKTWA 600 PVYFMQDFFP FVVSARGSQG AFSLFKENVL PKDKIENLIE KYEEMQDKIK KTDEEDVLEA 660 ATEPSCFSLQ PIERHASRVY TRQIFLKVQK ELLHSTAFKV QEIERGTLYR LDKAYSYENP 720 EYDRDSFEVS IEPGLTDTYT CQCTKFARDG ILCCHVFRLF TQFGIDEIPE KYIVARWTDG 780 FREEQLERRE EGRLVVAAQR EEDAARYAAL MSKAAGIGRE ICGDGAKCDE FMLELDRIRE 840 KMATMAMAND HV

Sequence ? help Back to Top

Protein Sequence Length: 852 aa Download sequence

MEEYLAAYTA KEDPATPAQP AVQTASALPA RAAGSHAQQV PVAVAAPPTS SRVVAKSSNS  60
SAKTPGSSSN KRVIYIVAGD DGSHVPILRK VQVYGEEASK GYEKTPAPAC NVVKQARLDA  120
GKQPVRRPRI QLLSHNREER SAELMDDDEE AAIALSVKLE RNASYVDRSL QLVTAEEHDV  180
MEIDDISSDD TGSQSDSDSS SGSESEKEEG RFFYPAPEAL GTVKAPQVGM KFPTLEDAHE  240
YYNTYALQTG FVVVRGRNYK RQRFQLDCNR NRKVKLVEDL NLKRKRKKNV IEKTNCQAKI  300
IVKLIKGEWV IAAVQNEHNH PLSPSRSFTR FLTSQKHMSP EERSFSRVLQ QSRVPPGEIL  360
KILRRMSGFF RELPSKEKQA LILQSAEQWR KANLDVEKTL NHFEQLQLQD PCFFYTVQKD  420
EDGTLRSIFW TDARSRMDYE IFGDFVSFNT TFSTNRHNMP FVPITGMNSR GRTIVLGCAL  480
LQDRKAETYK WMLETFLQEM GGGQIPRSVI TSQDEAMAKA IAEVMPQARH RFCRWNGKAQ  540
EKMAAFVAAR GNMKAELDIL VDSSLTETEF EQGWSALIQR HDASENEYLQ LLWEMRKTWA  600
PVYFMQDFFP FVVSARGSQG AFSLFKENVL PKDKIENLIE KYEEMQDKIK KTDEEDVLEA  660
ATEPSCFSLQ PIERHASRVY TRQIFLKVQK ELLHSTAFKV QEIERGTLYR LDKAYSYENP  720
EYDRDSFEVS IEPGLTDTYT CQCTKFARDG ILCCHVFRLF TQFGIDEIPE KYIVARWTDG  780
FREEQLERRE EGRLVVAAQR EEDAARYAAL MSKAAGIGRE ICGDGAKCDE FMLELDRIRE  840
KMATMAMAND HV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	282	289	LKRKRKKN
2	284	288	RKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-75	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG058420.6