PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG058590.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LBD
Protein Properties Length: 163aa    MW: 16838.2 Da    PI: 8.7062
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG058590.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260112.13.9e-3516106190
            DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 
                       +C aCk+lrr+C+++Cv+apyf +eq +++fa++hk+FGasn  kll++lp  +r +a+ +++yeA+ r+rdPvyG+v+ i++lqqq++ +
  TRIDC6AG058590.3  16 PCGACKFLRRRCVAECVFAPYFSSEQgAARFAAIHKVFGASNAAKLLAHLPLADRCEAVVTITYEAQSRLRDPVYGCVAQIFALQQQVRPA 106
                       7***********************9989***********************************************************9765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
AAGGGAGGVA GVAGSPCGAC KFLRRRCVAE CVFAPYFSSE QGAARFAAIH KVFGASNAAK  60
LLAHLPLADR CEAVVTITYE AQSRLRDPVY GCVAQIFALQ QQVRPALVAI LQAQLMQARA  120
QIACGVQSTA SPVSHQWPDS SSSSIASLLR QQEVNSGSFA TGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42430.16e-58LBD family protein