PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG058590.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LBD
Protein Properties Length: 140aa    MW: 15115.7 Da    PI: 9.2327
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG058590.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260113.11.9e-35795188
            DUF260  1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqle 88
                      +C aCk+lrr+C+++Cv+apyf +eq +++fa++hk+FGasn  kll++lp  +r +a+ +++yeA+ r+rdPvyG+v+ i++lqqq++
  TRIDC6AG058590.4  7 PCGACKFLRRRCVAECVFAPYFSSEQgAARFAAIHKVFGASNAAKLLAHLPLADRCEAVVTITYEAQSRLRDPVYGCVAQIFALQQQVR 95
                      7***********************9989***********************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    
AGVAGSPCGA CKFLRRRCVA ECVFAPYFSS EQGAARFAAI HKVFGASNAA KLLAHLPLAD  60
RCEAVVTITY EAQSRLRDPV YGCVAQIFAL QQQVRPALVS FFFSHLLPCR SLLRSINQSV  120
AILQAQLMQA RAQIACGVQS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42430.14e-55LBD family protein