PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG061640.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HB-other
Protein Properties Length: 239aa    MW: 26615.1 Da    PI: 9.8747
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG061640.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox26.51.1e-0853117657
                       S--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC............TS-HHHHHHHHHHHHHHHHC CS
          Homeobox   6 tftkeqleeLeelFek.nrypsaeereeLAkkl............gLterqVkvWFqNrRakekk 57 
                       +ft+ ++  +ee+ +  n  p++  ++ L+++              ++ +qV +WFqNrR+ +k+
  TRIDC6AG061640.2  53 RFTHREVAKMEEVLRDlNAMPQRPVIQALTDEFntsshrsgngkvPVQYKQVHTWFQNRRYTQKR 117
                       69999999*******99*************************99999***************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 239 aa     Download sequence    
KHRRSTKRDL KKEAKADRSK GTHSTGSSLL PPAQQPGAGE VRMTGLPPRL VFRFTHREVA  60
KMEEVLRDLN AMPQRPVIQA LTDEFNTSSH RSGNGKVPVQ YKQVHTWFQN RRYTQKRRGE  120
RPPARGKMLP TGAEAQHPAS YWVQSSCPSN AGNTSSDGGL VQLEAKSPRN GAWYDVAAIQ  180
SCRLSETGDQ EVQVWFSGFG AEEEEWINVC KSVRLRSVPC IATECVGVLP GDLILCYQV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18380.13e-48HB-other family protein