PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG001490.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CAMTA

Protein Properties

Length: 1531aa MW: 171690 Da PI: 7.7591

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG001490.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	169.8	4e-53	1038	1154	2	117
CG-1 2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseen 91 lke ++rwlk++e++ iL n+e+ ++t+e++++p+sgsl+Lynr++ r+frkDGy w++kkdg+tv E+he+LKvg+v++l+cyYah+e+n TRIDC6BG001490.3 1038 LKEaRSRWLKPSEVYYILLNHEQLHITHEPPNKPPSGSLFLYNRRVNRFFRKDGYAWRRKKDGRTVGEAHERLKVGNVDALSCYYAHGEQN 1128 56669************************************************************************************ PP CG-1 92 ptfqrrcywlLeeelekivlvhylev 117 p fqrr +w+Le ++++ivlv+y+ev TRIDC6BG001490.3 1129 PYFQRRYFWMLEPAYDHIVLVQYREV 1154 **********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 1531 aa Download sequence
MRRLAQPPIY PMDATTTPPI ISMDAAAPPS TSIVAAPTPP STSTMALTGE ARKKRPGHEL 60 PRSGCKKRKK NIAAVQEEPA KRAAAMEGSP VSASLGAMGS LPRKLDELLA TRHWVLRGAL 120 MDEIEQLTTD LCILYKLMLK LSDAPQEPPM AARYWMKEVR ELSYDMDDFA DQFLHAHGRA 180 KIRRAARHKN KKISRVKIKC LRERRRWRPW ITDKISEFRT RAQEAIQRYQ RYKFDDCASS 240 PGFSRIGHEL PSIWSDADDL VGMEGPTDEL ERWLINGEEQ LKVVSIVGVA GIGKTTLALK 300 LWGKLCGQFE CGAFVRTAQK PDMRGILRNI LFQVLPHQPP NHGEMRHLIN DLREYLQDKR 360 YFVIIDDLWA TSVWDVVSRA FPQSNSCSRI ITTTEIMEVA LACRCFCPEH IFKMEPLSDD 420 DSEKLLLQRM LVPGNQSPQQ FDDVIPQVMR SCGGLPLAII IVARILASQP EKLEQWGSTQ 480 NSSGSIFGAN PSMEGFMGRI LNICFISLPH YLKTCLLHLS TYPEGYLFLK YDVVKQWVAD 540 GFICANEGQD MEEVAGSYFG ELVSMGLIQV MDISCDFESL SYSVHQLVLD LITYKSVEEN 600 FITVVDYSQT TIPLADKVRR LSLHFGSATC ATTPESTRLS QVRSLFFSGL FNCMPSFVVF 660 KLLRVLILHL WDDTGTKTLN LTGICELFRL RYLQVTCNVT VKLPDKIEGM KHLETLEINT 720 QVLDIPLDIV RLPSLLHLCL RGANLPSGIG CIRSLRTLMY FDLGNSSEDN LWDLGELTNL 780 RDLHLTFSSS LSSEHLKRNL IALASLLGKL CNLKSLTLAA GTAGTVGTVV LFDGSSGMSA 840 PIFLERLELL PHICIFSRLP KCIGQLRKIC IMKVAVRELP MSDIAILTGL PSLTVLWLSV 900 QTAPEGRIVF SDRAFSVLKY FKFRCGVLCM SFMAGTMPNL RRLKLGFNAH IGEKYDNMLA 960 GIEHLLTLQY IAAQIGATTE SDWRAAESAI NNAIDKHPRF PRSNLQWVDP IEEECRPSEK 1020 HHWSQEKGTL GFDINVLLKE ARSRWLKPSE VYYILLNHEQ LHITHEPPNK PPSGSLFLYN 1080 RRVNRFFRKD GYAWRRKKDG RTVGEAHERL KVGNVDALSC YYAHGEQNPY FQRRYFWMLE 1140 PAYDHIVLVQ YREVAEGRYY STLSNESAES LSKLSYPNYL HGNHGSTPDF SEGNGSIQSS 1200 ITEASSYSAN KEYNHDTRLT LTRKQQFSIR EISPEWAFCY EITKVIITGD FLCDPSNICW 1260 AVMFGDIEVP VEIVQPGVLR CRTPLHSAGK LTLCITTGNM KVCSEFRDFE FRANSAASSF 1320 TDLAPLSRSM KSAEELSLLA KFARILLRDN GSSAVSVDDP QPGRSPKVQM NEENWQRLIN 1380 ALDVGCESPL RGVHWIMEEL LKSKLQQWLS LKLQGDDGTC SLSRNEQGIM HLISALGYDW 1440 ALSSVLGAGV GINLRDSNGW TALHWAAYFG REKMVAALVA AGASAPAVTD PSAQDPVGKT 1500 AAFLASERGH MGLAGYLSEV SLTSNLASLT K

Sequence ? help Back to Top

Protein Sequence Length: 1531 aa Download sequence

MRRLAQPPIY PMDATTTPPI ISMDAAAPPS TSIVAAPTPP STSTMALTGE ARKKRPGHEL  60
PRSGCKKRKK NIAAVQEEPA KRAAAMEGSP VSASLGAMGS LPRKLDELLA TRHWVLRGAL  120
MDEIEQLTTD LCILYKLMLK LSDAPQEPPM AARYWMKEVR ELSYDMDDFA DQFLHAHGRA  180
KIRRAARHKN KKISRVKIKC LRERRRWRPW ITDKISEFRT RAQEAIQRYQ RYKFDDCASS  240
PGFSRIGHEL PSIWSDADDL VGMEGPTDEL ERWLINGEEQ LKVVSIVGVA GIGKTTLALK  300
LWGKLCGQFE CGAFVRTAQK PDMRGILRNI LFQVLPHQPP NHGEMRHLIN DLREYLQDKR  360
YFVIIDDLWA TSVWDVVSRA FPQSNSCSRI ITTTEIMEVA LACRCFCPEH IFKMEPLSDD  420
DSEKLLLQRM LVPGNQSPQQ FDDVIPQVMR SCGGLPLAII IVARILASQP EKLEQWGSTQ  480
NSSGSIFGAN PSMEGFMGRI LNICFISLPH YLKTCLLHLS TYPEGYLFLK YDVVKQWVAD  540
GFICANEGQD MEEVAGSYFG ELVSMGLIQV MDISCDFESL SYSVHQLVLD LITYKSVEEN  600
FITVVDYSQT TIPLADKVRR LSLHFGSATC ATTPESTRLS QVRSLFFSGL FNCMPSFVVF  660
KLLRVLILHL WDDTGTKTLN LTGICELFRL RYLQVTCNVT VKLPDKIEGM KHLETLEINT  720
QVLDIPLDIV RLPSLLHLCL RGANLPSGIG CIRSLRTLMY FDLGNSSEDN LWDLGELTNL  780
RDLHLTFSSS LSSEHLKRNL IALASLLGKL CNLKSLTLAA GTAGTVGTVV LFDGSSGMSA  840
PIFLERLELL PHICIFSRLP KCIGQLRKIC IMKVAVRELP MSDIAILTGL PSLTVLWLSV  900
QTAPEGRIVF SDRAFSVLKY FKFRCGVLCM SFMAGTMPNL RRLKLGFNAH IGEKYDNMLA  960
GIEHLLTLQY IAAQIGATTE SDWRAAESAI NNAIDKHPRF PRSNLQWVDP IEEECRPSEK  1020
HHWSQEKGTL GFDINVLLKE ARSRWLKPSE VYYILLNHEQ LHITHEPPNK PPSGSLFLYN  1080
RRVNRFFRKD GYAWRRKKDG RTVGEAHERL KVGNVDALSC YYAHGEQNPY FQRRYFWMLE  1140
PAYDHIVLVQ YREVAEGRYY STLSNESAES LSKLSYPNYL HGNHGSTPDF SEGNGSIQSS  1200
ITEASSYSAN KEYNHDTRLT LTRKQQFSIR EISPEWAFCY EITKVIITGD FLCDPSNICW  1260
AVMFGDIEVP VEIVQPGVLR CRTPLHSAGK LTLCITTGNM KVCSEFRDFE FRANSAASSF  1320
TDLAPLSRSM KSAEELSLLA KFARILLRDN GSSAVSVDDP QPGRSPKVQM NEENWQRLIN  1380
ALDVGCESPL RGVHWIMEEL LKSKLQQWLS LKLQGDDGTC SLSRNEQGIM HLISALGYDW  1440
ALSSVLGAGV GINLRDSNGW TALHWAAYFG REKMVAALVA AGASAPAVTD PSAQDPVGKT  1500
AAFLASERGH MGLAGYLSEV SLTSNLASLT K

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	52	70	RKKRPGHELPRSGCKKRKK
2	53	71	RKKRPGHELPRSGCKKRKK
3	61	69	PRSGCKKRK
4	66	70	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	1e-72	CAMTA family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG001490.3