PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG001960.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARR-B
Protein Properties Length: 215aa    MW: 23782.2 Da    PI: 9.6546
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG001960.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like22.82.1e-07189209121
           G2-like   1 kprlrWtpeLHerFveaveqL 21 
                       k++++Wtpe+He Fv+av+qL
  TRIDC6BG001960.1 189 KKKVEWTPEMHELFVNAVTQL 209
                       6899****************9 PP
2Response_reg42.43.8e-15161261108
                       EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTT....SEHHHHHHHHHHHTTTSEEEEEESTTTHHHHH CS
      Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempg....mdGlellkeireeepklpiivvtahgeeedal 87 
                       vl vdD+p+ ++ l+q+l++ gy ev+  +++ +al+ ++++   +D i++  +  g    mdGl+llk+  ++   + i+v+++ +++e+++
  TRIDC6BG001960.1  16 VLAVDDDPVCLQTLTQMLRRGGY-EVTPSASPADALKEVEKNPdgIDFIMTVAQTRGrgrgMDGLDLLKRVGKRY--PVILVFSGDETMETRE 105
                       799********************.777777777888888777779999999866655423478888888885555..57888899999***** PP

                       HHHHTTESEEEESS--HHHHH CS
      Response_reg  88 ealkaGakdflsKpfdpeelv 108
                       +  + Ga    +Kp   ++++
  TRIDC6BG001960.1 106 RGKQGGACYLMEKPLRDSQIY 126
                       **************9999885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
QDMATAKLME TEGLKVLAVD DDPVCLQTLT QMLRRGGYEV TPSASPADAL KEVEKNPDGI  60
DFIMTVAQTR GRGRGMDGLD LLKRVGKRYP VILVFSGDET METRERGKQG GACYLMEKPL  120
RDSQIYFIWQ QVVRWRRKAA GAVTENPNPR HSQGIHLDDT PRKRGQGVND SNKGKGASEG  180
GLQLGITKKK KVEWTPEMHE LFVNAVTQLK TTGGA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.14e-18ARR-B family protein