PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG002050.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 257aa MW: 30010.2 Da PI: 9.1278

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG002050.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	30.1	1.6e-09	14	53	51	90
FAR1 51 errtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++ +++++r++C+a +++ +++d+ w++++++++HnH++ TRIDC6BG002050.2 14 KEANSTSSRCQCQAIIRLLRTEDNGWYINEFRSNHNHQML 53 6678999******************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 257 aa Download sequence
MHAGVRVLLL GKPKEANSTS SRCQCQAIIR LLRTEDNGWY INEFRSNHNH QMLNTCAEKL 60 HFPSHRHIDK YTRELVSQLR ENNVNLSKVY SILATFFGRV ENVPFTKRCL RTLCGKLSRE 120 QADDDVRKTM AIFSEMKVQD SEFTYNFQVD EESRIRTLMW TNGRSKKQYH HFGDVVTFDT 180 TYKTNLYDMP FGIFVGVNNH FQSVLYAGVL MRDETVDTFK WIFDEFVKMM GGKRPITILT 240 DTHGILEHTK RNGSTYA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	4e-37	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG002050.2