PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG002060.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 173aa    MW: 18328.6 Da    PI: 5.1071
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG002060.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix70.23.8e-222622686
          trihelix 26 lkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
                      lk+plWeevs++m++ g+  rs+k+Ckekwen+nk+++k ke+ kkr + + +tcpyfd+l+
  TRIDC6BG002060.1  2 LKGPLWEEVSARMAAAGYgGRSAKRCKEKWENINKYFRKAKESGKKR-PAHAKTCPYFDELD 62
                      689***************99*************************98.99999*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 173 aa     Download sequence    
GLKGPLWEEV SARMAAAGYG GRSAKRCKEK WENINKYFRK AKESGKKRPA HAKTCPYFDE  60
LDRLYSRSSA HASGASSAAG NNTSTKATAN AITSADDAAN KASSELLDAV VKYPADTHYG  120
PPPGFPNDGG NADTKDDGEG DADMGRASGR AGEEHDDEAG QSHGHDDDDE DDH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76890.26e-25Trihelix family protein