PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG003250.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

M-type_MADS

Protein Properties

Length: 203aa MW: 22813.4 Da PI: 10.3415

Description

M-type_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG003250.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	38.3	1.7e-12	3	46	3	46
--SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEE CS SRF-TF 3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgkl 46 i n+s r t+ kR + ++KKA + +LC+a+++v+++++ ++ TRIDC6BG003250.1 3 IRNDSTRLNTLKKRTKNLMKKAGDVATLCNAKACVLVYGEGTTV 46 89*************************************97665 PP

Sequence ? help Back to Top
Protein Sequence Length: 203 aa Download sequence
RYIRNDSTRL NTLKKRTKNL MKKAGDVATL CNAKACVLVY GEGTTVPEVF PSQAKAVAIL 60 NRFKSMTEVP QLKKTMDQET ILSQRLVQLR HQVEKIRRER EDREARILLH KALVSGDLPG 120 NIAELTTMAW KMELILKSLG ERTTNISGQP PVYQAQAPYV TGGMDMGSPM YQALRQQQKG 180 WLDMARSKGD PDAQIYNGHN SGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65300.1	3e-17	M-type_MADS family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG003250.1