PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG009320.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

LBD

Protein Properties

Length: 223aa MW: 24384.2 Da PI: 6.0096

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG009320.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	122	3.1e-38	15	115	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlka 92 +C aCk+lrrkC+++Cv+ap+f++eq +++f ++hk+FGasnv+kll++lp +r++a++++ yeA+ar++dPvyG+v++i++lqqq +l+a TRIDC6BG009320.1 15 PCGACKFLRRKCVNGCVFAPHFCHEQgAAHFGAIHKVFGASNVSKLLTSLPAIDRREAAATISYEAQARLHDPVYGCVAHIFALQQQAVNLQA 107 7***********************89************************************************************* PP DUF260 93 elallkee 100 +l++lk++ TRIDC6BG009320.1 108 QLESLKAQ 115 *99987 PP

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence
NIDQVAGAMT GFSSPCGACK FLRRKCVNGC VFAPHFCHEQ GAAHFGAIHK VFGASNVSKL 60 LTSLPAIDRR EAAATISYEA QARLHDPVYG CVAHIFALQQ QAVNLQAQLE SLKAQAPQGY 120 TNTYSASSPE EDSIKAEVMA CQKGEARMPR PAELCPSVKS ESESYFGNGL MTCNSMQSSQ 180 DYNISHVYTP DYTAPFNDDG IHSSTMFPVD IQEYLQENGN YWH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42440.1	2e-51	LBD family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG009320.1