PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG009320.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LBD
Protein Properties Length: 135aa    MW: 14440.8 Da    PI: 8.3017
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG009320.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF2601185.7e-3711101190
            DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 
                       +C aCk+lrrkC+++Cv+ap+f++eq +++f ++hk+FGasnv+kll++lp  +r++a++++ yeA+ar++dPvyG+v++i++lqqq++q 
  TRIDC6BG009320.2  11 PCGACKFLRRKCVNGCVFAPHFCHEQgAAHFGAIHKVFGASNVSKLLTSLPAIDRREAAATISYEAQARLHDPVYGCVAHIFALQQQVSQF 101
                       7*************************89************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    
VAGAMTGFSS PCGACKFLRR KCVNGCVFAP HFCHEQGAAH FGAIHKVFGA SNVSKLLTSL  60
PAIDRREAAA TISYEAQARL HDPVYGCVAH IFALQQQVSQ FCISAALTLT STTILLLSQI  120
SFGELLIAWT VITQN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42440.17e-54LBD family protein