PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG010020.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 253aa    MW: 28306.8 Da    PI: 8.782
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG010020.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM163.67.3e-51181431128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                       lppGfrFhPtdeelv +yL+++++g++ ++  +i+evd+y+++Pw+Lp+++  + +ewyfF++rd+ky++g+r+nra+  gyWkatg d++v 
  TRIDC6BG010020.2  18 LPPGFRFHPTDEELVADYLCARAAGRPAPV-PIIAEVDLYRFDPWELPERALFGAREWYFFTPRDRKYPNGSRPNRAAGGGYWKATGADRPVA 109
                       79*************************999.88***************8777899************************************** PP

               NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +  g++vg+kk Lvfy+gr   g+ktdW+mheyrl
  TRIDC6BG010020.2 110 R-AGRTVGIKKALVFYHGRPAAGVKTDWIMHEYRL 143
                       9.999****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    
TMVMAAAERR DAEAELNLPP GFRFHPTDEE LVADYLCARA AGRPAPVPII AEVDLYRFDP  60
WELPERALFG AREWYFFTPR DRKYPNGSRP NRAAGGGYWK ATGADRPVAR AGRTVGIKKA  120
LVFYHGRPAA GVKTDWIMHE YRLAGAGAKK DGSSLRLDDW VLCRLYNKKN QWEKMQRQRQ  180
EEEEVAAKAA ASQSVSWGET RTPESDVDND TFLELDSWAT TTGSWGSAST TCRAPAPSCC  240
HGRTPTPPRS CRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G63790.14e-78NAC family protein