PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG017850.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 252aa    MW: 27766 Da    PI: 4.1476
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG017850.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP230.58.8e-101351855
               AP2 18 eIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      eIrdps+    +r++lg+f +aeeAa+a++  +++++g
  TRIDC6BG017850.2  1 EIRDPSK---GARVWLGTFNSAEEAARAYDVEARRIRG 35
                      7999864...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
EIRDPSKGAR VWLGTFNSAE EAARAYDVEA RRIRGNKAKV NFPKEPTVPQ KRRARPAAPK  60
APKRSVAHEP SVMSSINNLA NPNAFIYPSA DFASNQPLAL PDNVSFVPAM NFVAPVEAFV  120
MNPYSDQGSN SFGCSDLDWD YDTKTPDIPF IAPISTIAEE AESALAQSNA YNSVVIAEAA  180
ESALAQSNTY NPVMPRVMEN NDVDFEAWTR FLMDDSVDEP IDSLLNFNVP QDVIVNMDLW  240
SFDDIPMCGE LL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72360.12e-20ERF family protein