PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG019640.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

G2-like

Protein Properties

Length: 372aa MW: 41709.5 Da PI: 8.9104

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG019640.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	98.9	3.4e-31	186	240	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r+rWt eLHerFvea+++LGG+ekAtPk +l+lmkv+gLt+ hvkSHLQ YR TRIDC6BG019640.4 186 KTRMRWTLELHERFVEALKKLGGPEKATPKGVLKLMKVEGLTIFHVKSHLQNYRH 240 68****************************************************6 PP
2	Myb_DNA-binding	52.7	9.5e-17	188	239	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++v+a k+lGg+ t+k + + m +g+t ++ks++q+y+ TRIDC6BG019640.4 188 RMRWTLELHERFVEALKKLGGPekaTPKGVLKLMKvEGLTIFHVKSHLQNYR 239 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 372 aa Download sequence
MMLLTSRMLT YQTQSHRALP HSVQACTHRH RRTPNYAGKS AVCLSCLILL NVTSSSIQLR 60 KSSVSALLFA AGPSNGGQGH DEDSHDLKDF FNLCGNASDS SFHRGGNDMA FSEQLEFQFL 120 SEQLGIAITD NEEIPRLDDI CGIPPQWPPV LVSPSSDHES LHSGGCPVKV QLSSSPSSSG 180 ATACSKTRMR WTLELHERFV EALKKLGGPE KATPKGVLKL MKVEGLTIFH VKSHLQNYRH 240 VKHIPEKKEV KRPCSEDNKA KSASGIDSGK KKSFQMAETL RMQMEVQKQL HEQLEVQRKL 300 QLRIEEHARY LQRILEQQKA RKFPVPKPKE KTEVNTTSAL SLKRKISDAE IEQNSQMDST 360 RPELQLDLES EP

Sequence ? help Back to Top

Protein Sequence Length: 372 aa Download sequence

MMLLTSRMLT YQTQSHRALP HSVQACTHRH RRTPNYAGKS AVCLSCLILL NVTSSSIQLR  60
KSSVSALLFA AGPSNGGQGH DEDSHDLKDF FNLCGNASDS SFHRGGNDMA FSEQLEFQFL  120
SEQLGIAITD NEEIPRLDDI CGIPPQWPPV LVSPSSDHES LHSGGCPVKV QLSSSPSSSG  180
ATACSKTRMR WTLELHERFV EALKKLGGPE KATPKGVLKL MKVEGLTIFH VKSHLQNYRH  240
VKHIPEKKEV KRPCSEDNKA KSASGIDSGK KKSFQMAETL RMQMEVQKQL HEQLEVQRKL  300
QLRIEEHARY LQRILEQQKA RKFPVPKPKE KTEVNTTSAL SLKRKISDAE IEQNSQMDST  360
RPELQLDLES EP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13040.1	1e-74	G2-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG019640.4