PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG021410.18

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 526aa MW: 57975.5 Da PI: 4.8427

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG021410.18	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	28.7	2.3e-09	230	276	6	52
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrR 52 ++ +e +++L + F+++ p +e +e L+++lg++ +++ WF+N R TRIDC6BG021410.18 230 RIPPEAVQVLRKSFAESELPAREVKESLSTELGISFEKIDKWFKNTR 276 667899***************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 526 aa Download sequence
MFYNVPVSVL CNLSGLPTGG PGWLCKFCLC KMKILEAVNA HLGTSLTVMC PSKDIFKEAT 60 KEVDSEDGLG EDWLSEYSGD EDYDPEENDF TSSSLDSGEE SISDQSNCSG SPLYSPNDDI 120 PGFISADFTD AEGFYHTNSN LGIDSGDDDV AEMLTYQRPK REVDYKRLNE EMFGKLTENE 180 KQSEDEDWGT NNRRKKRRVH SAGVGVKSAE GLSDVKSNEK AQPQRRKLFR IPPEAVQVLR 240 KSFAESELPA REVKESLSTE LGISFEKIDK WFKNTRCAAL RDRKAEGNSR VAGPSKRSRR 300 SAGKSGSSVK IDSVDNSYLI PASEIISVPT HPQGIPERKP ESTSRTVRRL VHDKGAPLCP 360 PAEVKESTSP TTKPGLNPSH VADRIINTEH RAASREAPVA FSDDPFFDAI LSYPTINTND 420 RAVSREDPLA FSDDPFLDVM LANRDIYTEE RAVSHEDVKR PSGDQPFLDV IQNVCGLEHR 480 LQRLKGDMLS SGAAPGGAGT AERDLQNQLV VLVPTAELKD KSQPSI

Sequence ? help Back to Top

Protein Sequence Length: 526 aa Download sequence

MFYNVPVSVL CNLSGLPTGG PGWLCKFCLC KMKILEAVNA HLGTSLTVMC PSKDIFKEAT  60
KEVDSEDGLG EDWLSEYSGD EDYDPEENDF TSSSLDSGEE SISDQSNCSG SPLYSPNDDI  120
PGFISADFTD AEGFYHTNSN LGIDSGDDDV AEMLTYQRPK REVDYKRLNE EMFGKLTENE  180
KQSEDEDWGT NNRRKKRRVH SAGVGVKSAE GLSDVKSNEK AQPQRRKLFR IPPEAVQVLR  240
KSFAESELPA REVKESLSTE LGISFEKIDK WFKNTRCAAL RDRKAEGNSR VAGPSKRSRR  300
SAGKSGSSVK IDSVDNSYLI PASEIISVPT HPQGIPERKP ESTSRTVRRL VHDKGAPLCP  360
PAEVKESTSP TTKPGLNPSH VADRIINTEH RAASREAPVA FSDDPFFDAI LSYPTINTND  420
RAVSREDPLA FSDDPFLDVM LANRDIYTEE RAVSHEDVKR PSGDQPFLDV IQNVCGLEHR  480
LQRLKGDMLS SGAAPGGAGT AERDLQNQLV VLVPTAELKD KSQPSI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29940.2	6e-34	HB-PHD family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG021410.18