PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG021410.19
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HB-other
Protein Properties Length: 385aa    MW: 42724 Da    PI: 9.3127
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG021410.19genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox29.31.5e-0989135652
                        S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS
           Homeobox   6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrR 52 
                        ++ +e +++L + F+++  p +e +e L+++lg++ +++  WF+N R
  TRIDC6BG021410.19  89 RIPPEAVQVLRKSFAESELPAREVKESLSTELGISFEKIDKWFKNTR 135
                        667899***************************************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    
MLTYQRPKRE VDYKRLNEVG ALTAFHPSQE MFGKLTENEK QSEDEDWGTN NRRKKRRVHS  60
AGVGVKSAEG LSDVKSNEKA QPQRRKLFRI PPEAVQVLRK SFAESELPAR EVKESLSTEL  120
GISFEKIDKW FKNTRCAALR DRKAEGNSRV AGPSKRSRRS AGKSGSSVKI DSVDNSYLIP  180
ASEIISVPTH PQGIPERKPE STSRTVRRLV HDKGAPLCPP AEVKESTSPT TKPGLNPSHV  240
ADRIINTEHR AASREAPVAF SDDPFFDAIL SYPTINTNDR AVSREDPLAF SDDPFLDVML  300
ANRDIYTEER AVSHEDVKRP SGDQPFLDVI QNVCGLEHRL QRLKGDMLSS GAAPGGAGTA  360
ERDLQNQLVV LVPTAELKDK SQPSI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29940.25e-24HB-PHD family protein